Motif 19

Information for 11-TCCCYCCKCT (Motif 19)

Reverse Opposite:

p-value:	1e-7
log p-value:	-1.833e+01
Information Content per bp:	1.872
Number of Target Sequences with motif	32.0
Percentage of Target Sequences with motif	3.80%
Number of Background Sequences with motif	556.2
Percentage of Background Sequences with motif	1.16%
Average Position of motif in Targets	48.4 +/- 26.3bp
Average Position of motif in Background	48.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:	1
Score:	0.71
Offset:	-3
Orientation:	reverse strand
Alignment:	---TCCCYCCKCT NCTTCCCGCCC--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:	2
Score:	0.68
Offset:	-3
Orientation:	reverse strand
Alignment:	---TCCCYCCKCT NYTTCCCGCC---

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:	3
Score:	0.66
Offset:	1
Orientation:	reverse strand
Alignment:	TCCCYCCKCT -CCCCCCCC-

SP2/MA0516.1/Jaspar

Match Rank:	4
Score:	0.66
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCCYCCKCT---- GCCCCGCCCCCTCCC

PB0204.1_Zfp740_2/Jaspar

Match Rank:	5
Score:	0.65
Offset:	-4
Orientation:	forward strand
Alignment:	----TCCCYCCKCT--- AAATTCCCCCCGGAAGT

SP1/MA0079.3/Jaspar

Match Rank:	6
Score:	0.65
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCCYCCKCT GCCCCGCCCCC

MZF1/MA0056.1/Jaspar

Match Rank:	7
Score:	0.65
Offset:	0
Orientation:	reverse strand
Alignment:	TCCCYCCKCT TCCCCA----

E2F4/MA0470.1/Jaspar

Match Rank:	8
Score:	0.64
Offset:	-3
Orientation:	reverse strand
Alignment:	---TCCCYCCKCT NNTTCCCGCCC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:	9
Score:	0.64
Offset:	-1
Orientation:	reverse strand
Alignment:	-TCCCYCCKCT TTCCCGCCWG-

ZIC1/MA0696.1/Jaspar

Match Rank:	10
Score:	0.63
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCCYCCKCT--- GACCCCCCGCTGTG