Information for 9-CGCGCGCCCCGGGCAG (Motif 11)

A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C A G T C G T A C A C T G A C T G A T C G A C T G G T A C A C T G A T G C A C T G G T A C A T C G
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.5 +/- 29.3bp
Average Position of motif in Background73.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG
--TGCCCNNAGGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG
--TGCCCTNAGGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCAG
----CGCCTCAGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCAG
--TGCCCTGAGGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCAG
----AGCCTCAGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG
-------TNNGGGCAG
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG-
--NTNGCCTCAGGCNNN
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG
-------NGTGGGCAT
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCCCCGGGCAG-
--NTCGCCTCAGGCAAT
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCGCGCCCCGGGCAG
----AGCCTCAGGCA-
 A T G C C A T G G T A C T A C G A G T C A C T G A G T C A T G C G T A C A G T C A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T