Information for 8-AGAACAATGG (Motif 9)

C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
Reverse Opposite:
G T A C A G T C G T C A A C G T A C G T C T A G A C G T A G C T G T A C A G C T
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.832
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif211.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets40.7 +/- 26.7bp
Average Position of motif in Background48.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:AGAACAATGG-
-GAACAATGGN
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AGAACAATGG
VRAACAATGG
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:AGAACAATGG
AAAACAATGG
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:AGAACAATGG
-GAACAATGG
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AGAACAATGG-
-RAACAATGGN
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AGAACAATGG----
AATGAACAATGGAATT
 A C G T A C G T C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AGAACAATGG----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:AGAACAATGG
RNAACAATGG
 C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAATGG
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAATGG--
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C T G A A C T G C T G A C G T A G A T C C G T A G T C A C A G T C T A G C A T G A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A