Information for 5-AGATTAGTGA (Motif 8)

C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A A G T C C G A T C G T A G T C A C A G T T G A C A C G T
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.842
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif55.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets37.8 +/- 26.5bp
Average Position of motif in Background53.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGATTAGTGA-----
NAAANTTATTGAANCAN
 A C G T A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGATTAGTGA
RGGATTAR---
 A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAGTGA----
NNAATTAGTCACGGT
 A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGATTAGTGA--
--ACTAGTTAAC
 C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGATTAGTGA----
AGTTATTAATGAGGTC
 A C G T A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGATTAGTGA
GGATTAGC--
 C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGATTAGTGA
-AATTAGTG-
 C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAGTGA-----
NNAATTAATGACCNNN
 A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTAGTGA
GNGGATTAGN--
 A C G T A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTAGTGA
NNGGATTAGN--
 A C G T A C G T C G T A A C T G G T C A A C G T G C A T C G T A C T A G A C G T A T C G C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T