Information for 9-YTCCCAGCMGCWR (Motif 11)

A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G A G T C C A T G A C T G A G T C A C G T A C T G C T A G A C T G C T G A C T G A
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.5 +/- 18.4bp
Average Position of motif in Background52.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YTCCCAGCMGCWR
TTTCCCAGAAN---
 A C G T A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:YTCCCAGCMGCWR
---NCAGCTGCTG
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YTCCCAGCMGCWR
TGCCCAGNHW---
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--YTCCCAGCMGCWR
HTTTCCCASG-----
 A C G T A C G T A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YTCCCAGCMGCWR-
CCACACAGCAGGAGA
 A C G T A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YTCCCAGCMGCWR
--CGCAGCTGCG-
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:YTCCCAGCMGCWR
----CAGCTGNT-
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YTCCCAGCMGCWR-
--CACAGCAGGGGG
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:YTCCCAGCMGCWR---
-DCHCAGCAGGRGGCC
 A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YTCCCAGCMGCWR-
CCACACAGCAGGAGA
 A C G T A G C T A G C T A G T C A G T C A G T C C G T A A C T G A G T C G T A C C T A G A G T C C G A T C T A G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A