Information for 5-AGCYMCAGGAGGCGCT (Motif 9)

G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T
Reverse Opposite:
G T C A A C T G A G T C A C T G A G T C A G T C A C G T T A G C A G T C A G C T A C T G A C T G T C G A A C T G G T A C C G A T
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.9 +/- 26.4bp
Average Position of motif in Background56.7 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCYMCAGGAGGCGCT----
GCCASCAGGGGGCGCYVNNG
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCYMCAGGAGGCGCT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGCYMCAGGAGGCGCT
---CACAGCAGGGGG-
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:AGCYMCAGGAGGCGCT--
----------GGCGCGCT
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCYMCAGGAGGCGCT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGCYMCAGGAGGCGCT-
-----SDGCAGGTGCNS
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:AGCYMCAGGAGGCGCT
---------CGGAGC-
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGCYMCAGGAGGCGCT-
--DCHCAGCAGGRGGCC
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGCYMCAGGAGGCGCT
ATGCAACAGGTGG----
 A C G T G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGCYMCAGGAGGCGCT----
-----ATAAAGGCGCGCGAT
 G C T A A C T G A G T C A G C T T G A C G T A C T C G A C T A G A C T G G T C A A C T G A C T G T G A C C T A G A G T C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T