p-value: | 1e-11 |
log p-value: | -2.732e+01 |
Information Content per bp: | 1.869 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 0.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 35.0 +/- 16.8bp |
Average Position of motif in Background | 52.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATMARGTCSAMAG- GGCAAAAGTCCAATAA |
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Rarb/MA0857.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG---- -AAAGGTCAAAAGGTCA |
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Nr2f6(var.2)/MA0728.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG---- --GAGGTCAAAAGGTCA |
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Rarg/MA0859.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG----- --AAGGTCAAAAGGTCAA |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG---- --AGAGTCCAAAGTCCA |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG---- -CANAGNNCAAAGTCCA |
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RARA/MA0729.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG------- --GAGGTCAAAAGGTCAATG |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG CAAAGGTCAAGGG |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATMARGTCSAMAG -AAAAGTCAA--- |
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Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATMARGTCSAMAG- --TATGTAAACANG |
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