Information for 8-AGMACAGCCACSG (Motif 12)

C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
Reverse Opposite:
A G T C A T G C A C T G A C G T C T A G A C T G A G T C A C G T A C T G A C G T A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 29.9bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGMACAGCCACSG
CCAGGAACAG------
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGMACAGCCACSG
--CACAGN-----
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGMACAGCCACSG-
AGCAACAGCCGCACC
 A C G T C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGMACAGCCACSG
GGACCACCCACG-
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGMACAGCCACSG
----CAGCC----
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGMACAGCCACSG-
CCGCATAGCAACGGA
 A C G T C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGMACAGCCACSG--
---GCGACCACCGAA
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G A C G T A C G T
A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGMACAGCCACSG
AAACCACAGC-----
 A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGMACAGCCACSG
---BCAGACWA--
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGMACAGCCACSG
-----ATCCAC--
 C G T A A C T G G T C A C G T A A G T C C G T A A C T G A G T C A G T C G T C A A G T C A T C G A C T G
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T