p-value: | 1e-12 |
log p-value: | -2.790e+01 |
Information Content per bp: | 1.795 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 30.6 +/- 8.9bp |
Average Position of motif in Background | 50.2 +/- 26.6bp |
Strand Bias (log2 ratio + to - strand density) | 2.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCTCTTGGCTGCYGTC ----TWGTCTGV---- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCTCTTGGCTGCYGTC ----TTGGCA------ |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC ---NTTGGCANN---- |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC ------NGCTN----- |
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PB0051.1_Osr2_1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC--- ---CNNNGCTACTGTANNN |
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PB0050.1_Osr1_1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC--- ---TNNTGCTACTGTNNNN |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC CCGATTGGCT------ |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC -TGATTGGCTANN--- |
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TGIF1/MA0796.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCTCTTGGCTGCYGTC- -----TGACAGCTGTCA |
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NFIA/MA0670.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTCTTGGCTGCYGTC --NNTTGGCANN---- |
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