Information for 3-GGAABARCMR (Motif 3)

C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
Reverse Opposite:
G A T C C A T G C T A G G A T C A C G T T A C G C G A T A C G T G T A C A G T C
p-value:1e-23
log p-value:-5.405e+01
Information Content per bp:1.614
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif1178.1
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets45.7 +/- 23.3bp
Average Position of motif in Background49.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGAABARCMR
TGGAACAGMA-
 A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAABARCMR
TGGAAAA----
 A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAABARCMR
CCAGGAACAG---
 A C G T A C G T A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAABARCMR
NNTGGAAANN---
 A C G T A C G T A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAABARCMR
AATGGAAAAT---
 A C G T A C G T A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAABARCMR
AGAGGAA------
 A C G T A C G T A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAABARCMR
GGAAANCCCC
 C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Tcf21/MA0832.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAABARCMR----
GCAACAGCTGTTGT
 C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G A C G T A C G T A C G T A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAABARCMR
GGATTAGC--
 C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGAABARCMR--
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T C T A G C A T G C G T A C G T A A T G C C G T A C T A G G A T C G T A C C T A G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C