Information for 3-GCGGGAGGCRGGGCCG (Motif 5)

A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
Reverse Opposite:
A G T C T A C G A C T G A G T C A G T C A G T C A G C T A C T G A T G C A G T C A C G T A G T C G T A C G T A C A C T G A T G C
p-value:1e-15
log p-value:-3.611e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.3 +/- 21.0bp
Average Position of motif in Background57.7 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCGGGAGGCRGGGCCG
---GGGGGCGGGGCC-
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGAGGCRGGGCCG
GGGNGGGGGCGGGGC--
 A C G T A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGGGAGGCRGGGCCG
--AGGGGGCGGGGCTG
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCGGGAGGCRGGGCCG
---GGGGGCGGGGC--
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGGGAGGCRGGGCCG
----GAGSCCGAGC--
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCGGGAGGCRGGGCCG
--RGKGGGCGGAGC--
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCGGGAGGCRGGGCCG
--RGKGGGCGKGGC--
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGGGAGGCRGGGCCG
---GGGGGCGTGGC--
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGAGGCRGGGCCG
NGCCTGAGGCN------
 A C G T A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGGGAGGCRGGGCCG-
NAGANTGGCGGGGNGNA
 A T C G A G T C C A T G A C T G A C T G C G T A A C T G A T C G A G T C C T G A A C T G A C T G A C T G A G T C A G T C C T A G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A