Information for 8-CTTCAGCACCAAGGCC (Motif 20)

T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C G C A T C G A T A C T G A C T G A C G T A C T G A G T C C G A T A C T G C G T A C G T A A T C G
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 15.7bp
Average Position of motif in Background34.9 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTTCAGCACCAAGGCC------
-TTCAGCACCATGGACAGCGCC
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTTCAGCACCAAGGCC------
--TCAGCACCATGGACAGCTCC
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CTTCAGCACCAAGGCC-
---------CTAGGCCT
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CTTCAGCACCAAGGCC---
---------CAAGGHCANV
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTTCAGCACCAAGGCC-
-------NTCAAGGTCA
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTCAGCACCAAGGCC
-GTCAGCANNTN----
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CTTCAGCACCAAGGCC-
---------CNAGGCCT
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAGCACCAAGGCC
TGAGTCAGCA--------
 A C G T A C G T T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTTCAGCACCAAGGCC-
-------BTCAAGGTCA
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTTCAGCACCAAGGCC
NGTCAGCANTTT----
 T A G C A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G C T A C G T A A C T G A C T G G T A C A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T