Information for 10-GATTACAGTT (Motif 17)

A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
Reverse Opposite:
G T C A C G T A A G T C A C G T A C T G A C G T C G T A C T G A A G C T G T A C
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.809
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.7 +/- 25.2bp
Average Position of motif in Background44.2 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GATTACAGTT---
NANTATTATAATTNNN
 A C G T A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GATTACAGTT---
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GATTACAGTT
CGGATTAN----
 A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GATTACAGTT
RGGATTAR----
 A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTACAGTT
NGGATTAA----
 A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATTACAGTT
-ATTAAA---
 A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTACAGTT
GGGATTAA----
 A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GATTACAGTT---
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GATTACAGTT--
--TGGCAGTTGN
 A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GATTACAGTT---
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C T G C T G A A G C T A C G T G T C A G T A C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A