Information for 7-GCGCCTCTAG (Motif 15)

A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
Reverse Opposite:
G T A C A G C T T C G A A T C G C G T A A C T G C T A G A G T C A C T G A T G C
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.846
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif91.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets33.8 +/- 20.4bp
Average Position of motif in Background53.9 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGCCTCTAG
AGCGCGCC-----
 A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCGCCTCTAG-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTCTAG
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGCCTCTAG--
-CGCCTCAGGCA
 A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G A C G T A C G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGCCTCTAG----
--GGCTCYAKCAYC
 A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTCTAG
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCGCCTCTAG
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGCCTCTAG
TTTGGCGCCAAA--
 A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GCGCCTCTAG-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCCTCTAG--
-NGCCTNAGGCN
 A T C G G T A C A C T G A G T C A G T C A C G T A T G C A G C T T C G A A C T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T