Information for 14-CWGAGSGTGACTA (Motif 14)

A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A
Reverse Opposite:
C G A T C G T A A C T G A C G T A T G C C G T A A G T C A T G C A T G C A C G T A T G C C G A T A C T G
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 26.7bp
Average Position of motif in Background18.5 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CWGAGSGTGACTA
TCAGNGAGCGTGAC--
 A C G T A C G T A C G T A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CWGAGSGTGACTA-----
---ACCGTGACTAATTNN
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CWGAGSGTGACTA
----NCGTGACN-
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CWGAGSGTGACTA-
TGCGGAGTGGGACTGG
 A C G T A C G T A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CWGAGSGTGACTA--
-----GTTAACTAGN
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CWGAGSGTGACTA-----
-TGAGGGGGATTAACTAT
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------CWGAGSGTGACTA
GAGGGCAGCCAAGCGTGAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CWGAGSGTGACTA
MKGGGYGTGGCC-
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CWGAGSGTGACTA--
----GGATGACTCAT
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CWGAGSGTGACTA--
-AGGAGATGACTCAT
 A G T C C G T A A T C G C G T A A T C G A T C G A C T G A C G T A T C G C G T A A G T C A C G T C G T A A C G T A C G T
A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T