Information for 6-TGAACCTGAC (Motif 12)

A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
Reverse Opposite:
A C T G C G A T A G T C G T C A T A C G C A T G A C G T A G C T A G T C G T C A
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif93.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.4 +/- 31.3bp
Average Position of motif in Background46.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGAACCTGAC
NATGACCTTGA-
 A C G T A C G T A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGAACCTGAC
-NCACCTGTN
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGAACCTGAC
ATGACCTTGAA
 A C G T A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAACCTGAC--
TGACCTTGACCT
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAACCTGAC
TGACCTTGAV
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAACCTGAC
TACACCTGTC
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAACCTGAC-
---ARNTGACA
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C A C G T
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAACCTGAC--
TGACCTTGACCT
 A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGAACCTGAC--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGAACCTGAC
ATGACCTTGA-
 A C G T A C G T A C T G C T G A C G T A G A T C A T G C C A G T A C T G G C T A G T A C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T