Information for 7-GCAGGCCCTKCAGGCY (Motif 11)

A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
Reverse Opposite:
C T A G A T C G A T G C A G T C C G A T A C T G G T C A G T C A A T C G T C A G A T C G T G A C G T A C A C G T A C T G A T G C
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.740
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.9 +/- 23.3bp
Average Position of motif in Background50.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
---TGCCCTGAGGGCA
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
---TGCCCTGAGGGCA
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
---TGCCCTGAGGGCA
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCAGGCCCTKCAGGCY---
----DCHCAGCAGGRGGCC
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCAGGCCCTKCAGGCY
---NCCACTTCCGG--
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
-AAGGKGRCGCAGGCA
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
----TGCCCCCGGGCA
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY-
-----CACAGCAGGGGG
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCAGGCCCTKCAGGCY
----DCTCAGCAGG--
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCAGGCCCTKCAGGCY
----CCACTTCCGGC-
 A T C G G T A C T G C A A C T G A C T G A T G C A G T C T A G C C A G T A C G T A G T C G C T A A C T G A T C G A T G C G A T C
A C G T A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T