Information for 4-CATTACTCAGATC (Motif 4)

A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T A T G C A C G T A T C G G T C A A C T G G A C T G C T A C G T A C G A T A C T G
p-value:1e-17
log p-value:-4.133e+01
Information Content per bp:1.763
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.5 +/- 29.3bp
Average Position of motif in Background52.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CATTACTCAGATC
TCATCAATCA----
 A C G T A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATTACTCAGATC
RGCCATYAATCA----
 A C G T A C G T A C G T A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATTACTCAGATC
NATGAGTCANN--
 A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTACTCAGATC
GCCATAAATCA----
 A C G T A C G T A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CATTACTCAGATC
--TGAGTCATTTC
 A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATTACTCAGATC
NATGAGTCACN--
 A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATTACTCAGATC
-ATGASTCATH--
 A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTACTCAGATC--
-ATGAGTCATNTNNT
 A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CATTACTCAGATC
GGCCATAAATCA----
 A C G T A C G T A C G T A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATTACTCAGATC
NNATGASTCATH--
 A C G T A G T C C G T A C G A T C G A T C T G A G T A C A C G T A T G C C G T A A T C G G T C A A C G T A G T C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T