Information for 9-AAAGCGTTAA (Motif 13)

C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A
Reverse Opposite:
G A C T A C G T G T C A C G T A A T G C A C T G A T G C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.383e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif45.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.9 +/- 29.3bp
Average Position of motif in Background55.6 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0046.1_Mybl1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AAAGCGTTAA---
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AAAGCGTTAA---
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

MYBL1/MA0776.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAAGCGTTAA----
--ACCGTTAACGGT
 C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAGCGTTAA
AAACMATTAN
 C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGCGTTAA
AAGGTGTKAA
 C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCGTTAA
AANTCATGCGTGAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAGCGTTAA
-AACCGANA-
 C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAGCGTTAA-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAGCGTTAA-------
TGATTGTTAACAGTTGG
 C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAGCGTTAA-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A C G T A C G T A T A C G G T A C A T C G A C G T A C G T G T C A C G T A A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T