Information for 3-ACAGWGCCACCTGCTS (Motif 6)

G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A C T A G A G T C C T G A A T C G A T C G C G A T C T A G T A C G A G T C C G A T A T G C C G A T A C T G A C G T
p-value:1e-15
log p-value:-3.548e+01
Information Content per bp:1.747
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 22.5bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ACAGWGCCACCTGCTS
----SNGCACCTGCHS
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACAGWGCCACCTGCTS---
---CNGACACCTGTTCNNN
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ACAGWGCCACCTGCTS---
----GGCCYCCTGCTGDGH
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACAGWGCCACCTGCTS----
ANAGTGCCACCTGGTGGCCA
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACAGWGCCACCTGCTS--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:ACAGWGCCACCTGCTS--
------CCCCCTGCTGTG
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACAGWGCCACCTGCTS
-----NNCACCTGNN-
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACAGWGCCACCTGCTS----
-TAGCGCCCCCTGGTGGCCA
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:ACAGWGCCACCTGCTS
-------CACGTGNT-
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:ACAGWGCCACCTGCTS
------NCACCTGTN-
 G T C A G T A C C G T A A T C G G C T A A C T G A G T C A G T C C G T A A T G C A T G C A G C T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T