Information for 17-CCAGCCTCAGCGC (Motif 19)

A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C
Reverse Opposite:
A C T G T G A C A T C G A G T C A C G T A C T G C G T A A C T G A T C G A G T C A C G T A C T G A T C G
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.821
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.1 +/- 23.8bp
Average Position of motif in Background61.8 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCAGCCTCAGCGC--
---GCCTCAGGGCAT
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCAGCCTCAGCGC--
-CCGCCCAAGGGCAG
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGCCTCAGCGC
BCAGACWA-----
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCAGCCTCAGCGC--
---SCCTSAGGSCAW
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGCCTCAGCGC--
-TCACCTCTGGGCAG
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAGCCTCAGCGC-------
YCAGGCWCAGTACCAGGCTC
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAGCCTCAGCGC-
--TGCCCCAGGGCA
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAGCCTCAGCGC-
--TGCCCCAGGGCA
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCAGCCTCAGCGC-
--TGCCCNGGGGCA
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAGCCTCAGCGC
-CAGCC-------
 A T G C A G T C C G T A A C T G A T G C A G T C G A C T G T A C G T C A A C T G T A G C A C T G A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T