Information for 1-MVKCACGTAC (Motif 1)

G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
Reverse Opposite:
A T C G C A G T C G T A A G T C A C T G A C G T A C T G G T C A A G T C C A G T
p-value:1e-71
log p-value:-1.644e+02
Information Content per bp:1.727
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif21.44%
Number of Background Sequences with motif864.8
Percentage of Background Sequences with motif4.44%
Average Position of motif in Targets51.7 +/- 23.5bp
Average Position of motif in Background49.4 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:forward strand
Alignment:MVKCACGTAC--
--GCACGTACCC
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:MVKCACGTAC
-BGCACGTA-
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:MVKCACGTAC
--GCACGTAY
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:MVKCACGTAC
--GCACGTNC
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:MVKCACGTAC
NGKCACGTGM
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:MVKCACGTAC
---CACGTG-
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T

Id2/MA0617.1/Jaspar

Match Rank:7
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:MVKCACGTAC
--TCACGTGC
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MVKCACGTAC-
-GTCACGTGAN
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:forward strand
Alignment:MVKCACGTAC
GGTCACGTGC
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:MVKCACGTAC-
-NGCACGTGNT
 G T C A T C A G C A G T A G T C C G T A A G T C A C T G A C G T G T C A A T G C A C G T
A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T