Information for 12-GCCAGGCTGT (Motif 12)

C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T
Reverse Opposite:
C G T A T A G C C G T A A C T G T G A C G T A C G A C T A T C G T A C G G A T C
p-value:1e-9
log p-value:-2.122e+01
Information Content per bp:1.658
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.56%
Number of Background Sequences with motif1819.4
Percentage of Background Sequences with motif3.81%
Average Position of motif in Targets45.9 +/- 27.2bp
Average Position of motif in Background51.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCCAGGCTGT-
-----GCTGTG
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCCAGGCTGT
----NGCTN-
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCTGT----
GGNGCGNCTGTTNNN
 A C G T C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCTGT----
NNTCCTGCTGTGNNN
 A C G T C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCAGGCTGT--
--CCTGCTGAGH
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCAGGCTGT
ANCAGGATGT
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCTGT----
TCNCCTGCTGNGNNN
 A C G T C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCAGGCTGT---
-ACAGGATGTGGT
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T A C G T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCTGT----
TNTCCTGCTGTGNNG
 A C G T C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCAGGCTGT
--TWGTCTGV
 C T A G A T G C T A G C C T G A C A T G A C T G T G A C G C A T A T C G G C A T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G