Information for 7-CTGTGATTGTTCT (Motif 8)

A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G G T C A C G T A A G T C C G T A C G T A A C G T A G T C C G T A T A G C C G T A A C T G
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.0 +/- 8.3bp
Average Position of motif in Background58.1 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CTGTGATTGTTCT----
---TAATTGTTCTAAAC
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGTGATTGTTCT---
NNTTTATTGTTCTNNN
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGTGATTGTTCT--
CTATAATTGTTAGCG
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTGTGATTGTTCT
--TTGATTGN---
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGATTGTTCT
TGCTGTGATTT----
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTGTGATTGTTCT----
-TTCAATTGTTCTAAAA
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGTGATTGTTCT
CNGTGATTTN---
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGATTGTTCT
GCAGTGATTT----
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGTGATTGTTCT----
CNNNTATTGTTCNNNNN
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTGTGATTGTTCT
-----ATTGTTA-
 A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T