Information for 5-RWTYTGCTMTKKTKTR (Motif 5)

C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A G T C A C T G A G T A C G T C A C G T A C A T G C G T A A C T G A G T C C G T A C T A G G T C A C G T A A G T C
p-value:1e-11
log p-value:-2.728e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 25.1bp
Average Position of motif in Background53.6 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR
-NNNTGTTGTTGTTNG
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR
----TGCTGTGATTT-
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR---
----TTCTATTTTTAGNNN
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR-----
----NNCTTTGTTTTGNTNNN
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RWTYTGCTMTKKTKTR
NNTTTTGTTTTGATNT-
 A C G T C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR-
-TNNTGCTACTGTNNNN
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RWTYTGCTMTKKTKTR
NCNTTTGTTATTTNN--
 A C G T C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:RWTYTGCTMTKKTKTR
-----GCTGTGGTTT-
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RWTYTGCTMTKKTKTR
-CCTTGCAATTTTTNN
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RWTYTGCTMTKKTKTR-
-----GCTATTTTTAGC
 C T A G C G A T A C G T G A T C A C G T A C T G A G T C A C G T G T A C A C G T A C G T A C T G A G C T A C G T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C