Information for 6-AGGTGACAAA (Motif 7)

C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
Reverse Opposite:
C G A T A C G T C G A T A C T G G C A T G T A C C G T A A G T C A G T C G A C T
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.834
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif71.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.6 +/- 26.1bp
Average Position of motif in Background48.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGGTGACAAA
AGGTGTCA--
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGGTGACAAA
AGGTGTGAAM
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGGTGACAAA
AAGGTGTGAAA
 A C G T C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGTGACAAA
AGGTGTTAAT
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGGTGACAAA
ARNTGACA--
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGTGACAAA
AGGTGTGAAA
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGGTGACAAA---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGGTGACAAA
-RHTGWCAR-
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTGACAAA--
AAGGTGTGAAAAT
 A C G T C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGGTGACAAA
--TTGACAG-
 C T G A C T A G C T A G C G A T A C T G C G T A G T A C C G T A G T C A C G T A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T