Information for 5-ACAGCAGAGGGAGCTC (Motif 6)

T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
Reverse Opposite:
A T C G C T G A A C T G G A T C A C G T A G T C T G A C T A G C A C G T G T A C A C G T A C T G A T G C C G A T T A C G A G C T
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.655
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif194.3
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets47.3 +/- 26.3bp
Average Position of motif in Background46.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAGAGGGAGCTC---
GCCASCAGGGGGCGCYVNNG
 A C G T T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAGCAGAGGGAGCTC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:ACAGCAGAGGGAGCTC
--------CGGAGC--
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGAGGGAGCTC
CACAGCAGGGGG-----
 A C G T T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAGAGGGAGCTC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACAGCAGAGGGAGCTC
-----AGAGGAA----
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACAGCAGAGGGAGCTC
----AACAGGAAGT--
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACAGCAGAGGGAGCTC
-----AGAGGAAGTG-
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ACAGCAGAGGGAGCTC--
--------GGGAGGACNG
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACAGCAGAGGGAGCTC
-----GGCGGGAARN-
 T C G A A T G C G C T A A T C G T G A C T C G A A C T G C G T A A C T G A C T G T C A G C G T A C T A G T G A C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T