Information for 12-AAAGAGGCCTCCC (Motif 11)

C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G A C T G A G T C A G T C A G C T A T G C A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 18.2bp
Average Position of motif in Background74.9 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAAGAGGCCTCCC
----AGGCCTNG-
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAGAGGCCTCCC
----AGGCCTAG-
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAAGAGGCCTCCC
---CNGTCCTCCC
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAGAGGCCTCCC----
---CAGGCCNNGGCCNN
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGAGGCCTCCC
CAAGACGCCTTA-
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAGAGGCCTCCC--
--AGGGGAATCCCCT
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AAAGAGGCCTCCC---
----GGACCACCCACG
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AAAGAGGCCTCCC
ACAAAGGNBCCT---
 A C G T A C G T C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAGGCCTCCC--
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAAGAGGCCTCCC--
---GGGGATTCCCCC
 C G T A C G T A C G T A A T C G C T G A A C T G A C T G A G T C A G T C C G A T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C