Information for 9-TGTGAMTWTCAGG (Motif 7)

A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
Reverse Opposite:
A G T C A G T C A G C T C T A G T C G A C G T A C G T A A C G T A C G T A G T C C T G A A G T C G T C A
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.779
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.9 +/- 17.9bp
Average Position of motif in Background59.3 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTGAMTWTCAGG
TGTGGATTNNN--
 A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGAMTWTCAGG-
--TGAGTGACAGSC
 A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTGAMTWTCAGG
---RCATTCCWGG
 A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTGAMTWTCAGG
NNTGTGGATTSS---
 A C G T A C G T A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGTGAMTWTCAGG
TATGTAAATAT----
 A C G T A C G T A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGTGAMTWTCAGG
-NTGATTGACAGN
 A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGTGAMTWTCAGG
AAGGTGTGAAAAT----
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGTGAMTWTCAGG
-BTGABTGACAGS
 A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGTGAMTWTCAGG
AAGGTGTKAA-------
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGTGAMTWTCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T C T A G G T C A G T C A A C G T C G A T A C G T A G T C C T G A C T A G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T