Information for 6-TGTGAATCCG (Motif 12)

A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G
Reverse Opposite:
G A T C A C T G A T C G G T C A A C G T A C G T A G T C G T C A A T G C C G T A
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.858
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif36.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.2 +/- 23.8bp
Average Position of motif in Background48.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGAATCCG-
TGTGGATTNNN
 A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTGAATCCG
TTTGAAACCG
 A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTGAATCCG
NNTGTGGATTSS
 A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGTGAATCCG---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTGAATCCG-------
-GTACATCCGGATTTTT
 A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATCCG-----
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATCCG
AAGGTGTGAA----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTGAATCCG----
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTGAATCCG-
GTGCGCATGCGC
 A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTGAATCCG
AGGTGTGAAA---
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G T C G A C G T A A C G T A T G C A G T C C A T G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T