Information for 4-CCAGTATGAGTTCTCT (Motif 5)

A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
Reverse Opposite:
C G T A C T A G C G T A A C T G C T G A C T G A G T A C G A C T A G T C C G T A A G C T C G T A A G T C C G A T A C T G A C T G
p-value:1e-16
log p-value:-3.719e+01
Information Content per bp:1.873
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 30.6bp
Average Position of motif in Background63.9 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT--
-TNNNATGATTTCNNCNN
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT---
--NNNCTGATATCTCNNNN
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
-----TTGACTTTT--
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
---GTTTCACTTCCG-
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
--ASTTTCACTTCC--
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
-----TTAAGTGCTT-
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
---CNGTGATTTN---
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCAGTATGAGTTCTCT
--AGTTTCAKTTTC--
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
-----ATGAGTCAT--
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCAGTATGAGTTCTCT
-CAGTTTCGNTTCTN-
 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C G T A C A T G A G C T A G C T A G T C A C G T A G T C C G A T
A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T