Information for 12-GTGGCAGAAGCAGCAA (Motif 23)

A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A
Reverse Opposite:
A C G T A C G T A T C G A G T C A C G T A C T G A G T C A G C T A C G T A G T C A C G T A C T G A G T C A G T C T C G A A G T C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 24.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA
ADGGYAGYAGCATCT-
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA
---GCTGASTCAGCA-
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A
A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA----
WNTGCTGASTCAGCANWTTY
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA-----
---GCTGAGTCAGCAATTTTT
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

MAFG/MA0659.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCAGAAGCAGCAA---
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGGCAGAAGCAGCAA
AGGTGHCAGACA------
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA---
----CTGAGTCAGCAATTT
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA--
--------NACAGGAAAT
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GTGGCAGAAGCAGCAA--
------GAAACTGAAACT
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GTGGCAGAAGCAGCAA
-------AAACCGCAA
 A C T G A C G T A C T G A C T G A G T C C G T A A C T G C G T A C T G A C T A G A G T C G T C A A C T G A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A