Information for 5-GCCGCCAGAGGGC (Motif 8)

T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C
Reverse Opposite:
A C T G A G T C T A G C T A G C A G C T A G T C A G C T T A C G A C T G A G T C C T A G T A C G A G T C
p-value:1e-12
log p-value:-2.777e+01
Information Content per bp:1.752
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif177.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets50.7 +/- 23.4bp
Average Position of motif in Background48.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCCGCCAGAGGGC-------
GCCASCAGGGGGCGCYVNNG
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCAGAGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCAGAGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGAGGGC--
-CCGCCCAAGGGCAG
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAGAGGGC-
--TGCCCNGGGGCA
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCCGCCAGAGGGC--
---GCCTCAGGGCAT
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGAGGGC--
-TTGCCCTAGGGCAT
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T
A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGAGGGC--
-TCACCTCTGGGCAG
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAGAGGGC-
--TGCCCTNGGGCA
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCGCCAGAGGGC-
--TGCCCCAGGGCA
 T A C G A T G C A G T C T C A G A G T C A G T C T C G A C T A G T C G A A T C G A T C G A C T G T G A C A C G T
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A