Information for 4-CAHCAGAGAVCTCHTT (Motif 5)

A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
Reverse Opposite:
C G T A C T G A C A G T C T A G C G T A C A T G A C G T A G C T G A T C A C G T A G T C A C G T A T C G C T G A A C G T C T A G
p-value:1e-18
log p-value:-4.261e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.1 +/- 19.3bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAHCAGAGAVCTCHTT------
-----GCAACCTCATTATNNNN
 A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAHCAGAGAVCTCHTT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAHCAGAGAVCTCHTT-
NNNCTGATATCTCNNNN
 A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAHCAGAGAVCTCHTT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAHCAGAGAVCTCHTT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CAHCAGAGAVCTCHTT--
--------AGCTCATTAT
 A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAHCAGAGAVCTCHTT------
-----NNNACCTCATTATCNTN
 A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CAHCAGAGAVCTCHTT
NNNAGATCAAAGGANNN---
 A C G T A C G T A C G T A C G T A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CAHCAGAGAVCTCHTT
GGTTAGAGACCT----
 A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CAHCAGAGAVCTCHTT
NANAGATCAAAGGGNNN---
 A C G T A C G T A C G T A C G T A G T C C G T A G A C T T A G C C G T A A C T G C G T A C T A G C T G A T C G A G A T C C G A T A G T C G C T A A G C T C G A T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T A C G T