Information for 2-ACTACAAYTCCCA (Motif 2)

T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A C T G C T G A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T
p-value:1e-25
log p-value:-5.797e+01
Information Content per bp:1.800
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif160.0
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets49.9 +/- 22.7bp
Average Position of motif in Background47.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:ACTACAAYTCCCA
ACTACAATTCCC-
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAYTCCCA------
RACTACAACTCCCAGVAKGC
 A C G T T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAYTCCCA------
AACTACAATTCCCAGAATGC
 A C G T T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACTACAAYTCCCA--
-----HTTTCCCASG
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTACAAYTCCCA-------
-----ATTTCCCAGVAKSCY
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAYTCCCA
NWAACCACADNN----
 A C G T A C G T A C G T T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ACTACAAYTCCCA-
--------TCCCCA
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACTACAAYTCCCA
--TKCTGTTCCA-
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACTACAAYTCCCA--
-----NYTTCCCGCC
 T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACTACAAYTCCCA
ATTTACGACAAATAGC-
 A C G T A C G T A C G T A C G T T G C A G T A C A G C T G T C A A G T C C T G A G C T A G A C T A G C T A G T C A G T C A G T C C T G A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T