Information for 7-AAGGCTGTAT (Motif 9)

C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C C G T A A C T G G A T C A G T C C A G T A C G T
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif88.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets49.8 +/- 28.2bp
Average Position of motif in Background54.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGGCTGTAT
--NGCTN---
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGCTGTAT
TWGTCTGV--
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAGGCTGTAT
---GCTGTG-
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGGCTGTAT----
--GGCTCYAKCAYC
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGGCTGTAT-
AAGGATATNTN
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTGTAT-----
AGGACGCTGTAAAGGGA
 A C G T A C G T C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTGTAT-----
AAGACGCTGTAAAGCGA
 A C G T A C G T C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTGTAT-----
AAGACGCTGTAAAGCGA
 A C G T A C G T C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL002.1_INR/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGGCTGTAT
NNNANTGA--
 C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTGTAT
BAACAGCTGT--
 A C G T A C G T C G T A G T C A C T A G C T A G A G T C A C G T T C A G G C A T C G T A A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T