Information for 5-GGGCGCGGTT (Motif 6)

A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
Reverse Opposite:
G C T A C T G A A T G C A T G C A C T G A G T C A C T G G T A C A G T C A T G C
p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.842
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif149.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets54.6 +/- 25.9bp
Average Position of motif in Background52.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGGCGCGGTT
-GGCGCGCT-
 A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCGGTT--
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCGGTT-
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCGGTT
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCGGTT
TGGGTGGGGC-
 A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCGGTT--
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCGGTT
GGGGGCGTGGN-
 A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCGGTT
AAGGGGGCGTGGCC
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGGCGCGGTT-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCGGTT
AGTGGGCGTGGC-
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C A C T G A G T C T A C G A T C G A G C T C G A T
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T