Information for 3-AAACCCTATGAGTGTR (Motif 3)

C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
Reverse Opposite:
A G C T C T G A G T A C C G T A A G T C A C G T A G T C C T G A C G A T C G T A C T A G A C T G T C A G A G C T A G C T A G C T
p-value:1e-97
log p-value:-2.246e+02
Information Content per bp:1.672
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif14.50%
Number of Background Sequences with motif60.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets56.4 +/- 25.5bp
Average Position of motif in Background43.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR---
--NTTNTATGAATGTGNNC
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

SOX21/MA0866.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR
-AACACTACCATTGTT
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR-
-AACACTGCAATTGTTC
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAACCCTATGAGTGTR-
-------TTRAGTGSYK
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR
------NTCAAGTGG-
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AAACCCTATGAGTGTR
GATAACATCCTAGTAG----
 A C G T A C G T A C G T A C G T C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AAACCCTATGAGTGTR----
----ACTATGAATGAATGAT
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Sox11/MA0869.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAACCCTATGAGTGTR
-AACAATTTCAGTGTT
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR-
-------TTGAGTGSTT
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AAACCCTATGAGTGTR
-------TTAAGTGC-
 C T G A C T G A T C G A A G T C T A G C G A T C G C A T G C T A A G C T T C A G T G C A T C A G A C G T A C T G G A C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T