Information for 22-GTGCAGAGTT (Motif 28)

A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A G T C A A G T C A C G T A T G C G A C T A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.960e+00
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif89.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets43.8 +/- 24.7bp
Average Position of motif in Background51.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GTGCAGAGTT-
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GTGCAGAGTT-
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGCAGAGTT--
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTGCAGAGTT---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTGCAGAGTT--
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTGCAGAGTT
AACAATGTGCAGTGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGCAGAGTT--
TAGGGCAAAGGTCA
 A C G T A C G T A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTGCAGAGTT--
--GCAGTGATTT
 A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGCAGAGTT-----
NTGCTGAGTCATCCN
 A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGCAGAGTT--
-TGCTGTGATTT
 A C T G A C G T A C T G A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T