Information for 23-CTCTGAGCTGAGGAGT (Motif 27)

A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T G T A C A T G C A C G T G T A C C G T A A C T G A T G C A C G T A G T C C G T A A C T G C T G A A C T G
p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.923
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.7 +/- 13.3bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCTGAGCTGAGGAGT
---TGACCTYA-----
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTCTGAGCTGAGGAGT------
-----NTNNNAGGAGTCTCNTN
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PH0058.1_Hoxb3/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTCTGAGCTGAGGAGT----
---TGAGCTAATTAGTTGGA
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTCTGAGCTGAGGAGT
--CTGACCTTTG----
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTCTGAGCTGAGGAGT
--ATGGGGTGAT----
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGAGCTGAGGAGT
TGACCTTTGACCTC------
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTCTGAGCTGAGGAGT
--GTGGGGTGAT----
 A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAGCTGAGGAGT
TNCCTTTGATGT-------
 A C G T A C G T A C G T A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAGCTGAGGAGT
CCTTTGATGT-------
 A C G T A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAGCTGAGGAGT
TGACCTTGACCT-------
 A C G T A C G T A C G T A G T C A G C T A G T C A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A T C G A C T G C G T A A C T G A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T