Information for 22-TTTCTTCCTCCCTGCC (Motif 23)

A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
Reverse Opposite:
A C T G A C T G T A G C C G T A A C T G C T A G A T C G T C G A A C T G C T A G G T C A C T G A A C T G C G T A G T C A C T G A
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.7 +/- 28.3bp
Average Position of motif in Background45.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTCCTCCCTGCC
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTCTTCCTCCCTGCC
TGTCTGDCACCT----
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTCTTCCTCCCTGCC
CTGTCTGTCACCT----
 A C G T A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTTCTTCCTCCCTGCC
----TTCCCGCCWG--
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTTCTTCCTCCCTGCC
CCGTCTTCCCCCTCAC-
 A C G T A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTTCTTCCTCCCTGCC-
---CTGGCAGNCTGCCA
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTTCTTCCTCCCTGCC
-TACTTCCTCTTTTN-
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTTCTTCCTCCCTGCC
--NCTTCCCGCCC---
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTTCTTCCTCCCTGCC
---CTTCCGGT-----
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C
A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TTTCTTCCTCCCTGCC--
---CTTTCANTATGACTV
 A G C T A C G T A C G T A G T C A G C T A C G T A G T C G T A C A G C T A T G C A G T C G T A C A C G T A T C G G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C