Information for 16-SCCAGGMTSTGTGCAG (Motif 14)

A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A G T C C G T A A G T C G C T A A T C G C G T A A C G T A T G C A G T C C A G T C A T G T A C G A T G C
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.749
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.4 +/- 20.9bp
Average Position of motif in Background50.5 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SCCAGGMTSTGTGCAG
GTCATGCHTGRCTGS--
 A C G T A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG-------
------NNNANTGCAGTGCNNTT
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG--
--NNGCGTGTGTGCNGCN
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--SCCAGGMTSTGTGCAG
NGTCACGCTTGGCTGC--
 A C G T A C G T A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG-----
----NTNTATGTGCACATNNN
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG-----
-YCAGGCWCAGTACCAGGCTC
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--SCCAGGMTSTGTGCAG
CGTCACGCATGACTGCA-
 A C G T A C G T A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG--
--NNNNTTGTGTGCTTNN
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:SCCAGGMTSTGTGCAG---
---GGGCCGTGTGCAAAAA
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:SCCAGGMTSTGTGCAG
ANCAGGATGT------
 A T C G A T G C G T A C G C T A A C T G A T C G G T C A A C G T A T G C C G A T C T A G A C G T A C T G G T A C C G T A A C T G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T