Information for 15-CGGGAYCTYGCTGTCC (Motif 13)

A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A G T A C C T G A C T A G A T G C C T G A G C T A T A C G C T G A A G C T A G T C A T G C T A G C A C T G
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.3 +/- 25.1bp
Average Position of motif in Background44.6 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC--
--AGNACAGNCTGTTCTN
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC-
-NAGNACANNNTGTNCT
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC
-VAGRACAKWCTGTYC
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC
-VAGRACAKNCTGTBC
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:CGGGAYCTYGCTGTCC----
----------CTGTTCCTGG
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC--
-GGGAACACGGTGTACCC
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC--
-GGGAACACAATGTTCCC
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGGAYCTYGCTGTCC--
-NGGAACATNATGTACCC
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CGGGAYCTYGCTGTCC
---------GCTGTG-
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CGGGAYCTYGCTGTCC-
---------GCTGTCAA
 A G T C A C T G A T C G A C T G C T G A A G C T A G T C C A G T A G C T A T C G A G T C A G C T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A