Information for 3-CCACAAGAGGGCG (Motif 4)

G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G C T A C T G A C G T A C T G A C T G
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.789
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.6 +/- 15.5bp
Average Position of motif in Background45.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAGAGGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGAGGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGAGGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCACAAGAGGGCG-----
-NNNAAGGGGGCGGGNNN
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCACAAGAGGGCG----
-----RGKGGGCGKGGC
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACAAGAGGGCG--
-CACAGCGGGGGGTC
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACAAGAGGGCG
CACCCCCGGGGGGG-
 A C G T A C G T G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCACAAGAGGGCG--
---NGCGTGGGCGGR
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCACAAGAGGGCG-----
----AAGGGGGCGTGGCC
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACAAGAGGGCG--
-ANTGCGGGGGCGGN
 G T A C A G T C G T C A G T A C T C G A C G T A A C T G C T G A A C T G C T A G C T A G T A G C A C T G A C G T A C G T
A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A