Information for 7-TTCAAGAGGCATT (Motif 12)

A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
Reverse Opposite:
C G T A T C G A A C G T A T C G A G T C A G T C A C G T A T G C A C G T A C G T A C T G C G T A C G T A
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 18.5bp
Average Position of motif in Background67.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0113.1_Nkx2-4/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGAGGCATT
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGAGGCATT
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGAGGCATT
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAGAGGCATT
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCAAGAGGCATT
NTCAAGTGG----
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCAAGAGGCATT
NTCAAGTGGN---
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCAAGAGGCATT
BTBRAGTGSN---
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCAAGAGGCATT-
--CAAGACGCCTTA
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCAAGAGGCATT
CTYRAGTGSY---
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCAAGAGGCATT
--GATGAGTCATN
 A C G T A C G T A G T C C G T A C G T A A T C G C G T A A C T G C T A G A T G C C G T A A G C T C G A T
A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G