Information for 1-TGCCACCTGCTGG (Motif 1)

A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G
Reverse Opposite:
G A T C T A G C G C T A A T C G A G T C C T G A A C T G T C A G C G A T A C T G C T A G A T G C T C G A
p-value:1e-15
log p-value:-3.525e+01
Information Content per bp:1.768
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif69.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets54.6 +/- 24.1bp
Average Position of motif in Background51.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.87
Offset:-6
Orientation:forward strand
Alignment:------TGCCACCTGCTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---TGCCACCTGCTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----TGCCACCTGCTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGCCACCTGCTGG--
GGCCYCCTGCTGDGH
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TGCCACCTGCTGG-
--CCCCCTGCTGTG
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGCCACCTGCTGG
SNGCACCTGCHS-
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCCACCTGCTGG
-NNCACCTGNN--
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCCACCTGCTGG
-GCCATCTGTT--
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCCACCTGCTGG--
GACCCCCCGCTGTGC
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCACCTGCTGG
TGACACCT-----
 A G C T A T C G A G T C A G T C G C T A A G T C A G T C A G C T T C A G A T G C C G A T A C T G C A T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T