Information for 7-ATGCCTGCCG (Motif 14)

T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
Reverse Opposite:
T A G C A C T G C T A G A G T C C G T A A C T G A T C G A T G C C G T A A G C T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.845
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif138.1
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets51.1 +/- 25.8bp
Average Position of motif in Background46.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGCCTGCCG
ATGCCAACC-
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATGCCTGCCG---
ACTATGCCAACCTACC
 A C G T A C G T A C G T T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATGCCTGCCG
ATGCCCACC-
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGCCTGCCG
TTGCGTGCVA
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGCCTGCCG--
-TGCCTGAGGCN
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCTGCCG
NNACTTGCCTT---
 A C G T A C G T A C G T A C G T T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGCCTGCCG-----
TNTCCTGCTGTGNNG
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGCCTGCCG
AGGCCTNG--
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGCCTGCCG----
ANTGCCTGAGGCAAN
 A C G T T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATGCCTGCCG---
---CCTGCTGAGH
 T C G A A C G T A T C G A T G C A G T C A C G T C T A G A G T C T G A C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A