Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 834)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 48153)	% of Background Sequences with Motif
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-85	-1.960e+02	0.0000	269.0	32.25%	4025.6	8.36%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-80	-1.854e+02	0.0000	214.0	25.66%	2631.7	5.46%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-73	-1.686e+02	0.0000	205.0	24.58%	2646.5	5.49%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-73	-1.684e+02	0.0000	262.0	31.41%	4349.8	9.03%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-65	-1.511e+02	0.0000	208.0	24.94%	3025.3	6.28%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-62	-1.433e+02	0.0000	180.0	21.58%	2370.0	4.92%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-59	-1.372e+02	0.0000	205.0	24.58%	3200.8	6.64%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-52	-1.213e+02	0.0000	239.0	28.66%	4689.3	9.73%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-49	-1.132e+02	0.0000	166.0	19.90%	2509.3	5.21%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-47	-1.092e+02	0.0000	124.0	14.87%	1441.6	2.99%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-45	-1.048e+02	0.0000	129.0	15.47%	1632.6	3.39%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-29	-6.812e+01	0.0000	155.0	18.59%	3242.5	6.73%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-22	-5.210e+01	0.0000	120.0	14.39%	2508.3	5.21%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-19	-4.392e+01	0.0000	54.0	6.47%	678.6	1.41%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-18	-4.303e+01	0.0000	52.0	6.24%	642.4	1.33%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-17	-4.011e+01	0.0000	53.0	6.35%	715.3	1.48%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-17	-4.011e+01	0.0000	57.0	6.83%	822.0	1.71%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-16	-3.895e+01	0.0000	43.0	5.16%	485.3	1.01%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-16	-3.788e+01	0.0000	61.0	7.31%	980.4	2.03%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-16	-3.780e+01	0.0000	55.0	6.59%	811.6	1.68%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-15	-3.656e+01	0.0000	33.0	3.96%	296.6	0.62%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-15	-3.454e+01	0.0000	68.0	8.15%	1275.3	2.65%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-14	-3.233e+01	0.0000	29.0	3.48%	260.6	0.54%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-13	-3.212e+01	0.0000	74.0	8.87%	1544.2	3.21%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-13	-3.117e+01	0.0000	32.0	3.84%	337.8	0.70%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-12	-2.841e+01	0.0000	39.0	4.68%	552.7	1.15%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-12	-2.789e+01	0.0000	77.0	9.23%	1794.5	3.72%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-9	-2.285e+01	0.0000	53.0	6.35%	1120.9	2.33%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-7	-1.661e+01	0.0000	61.0	7.31%	1664.0	3.45%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-6	-1.533e+01	0.0000	85.0	10.19%	2737.6	5.68%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-6	-1.502e+01	0.0000	151.0	18.11%	5818.3	12.08%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-6	-1.484e+01	0.0000	65.0	7.79%	1917.6	3.98%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-6	-1.428e+01	0.0000	9.0	1.08%	54.2	0.11%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-5	-1.354e+01	0.0000	130.0	15.59%	4951.3	10.28%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-5	-1.254e+01	0.0000	9.0	1.08%	67.2	0.14%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-4	-1.090e+01	0.0002	51.0	6.12%	1564.5	3.25%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-4	-1.086e+01	0.0002	53.0	6.35%	1651.8	3.43%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-4	-1.084e+01	0.0002	53.0	6.35%	1652.2	3.43%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-4	-1.013e+01	0.0004	117.0	14.03%	4675.2	9.70%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-4	-9.937e+00	0.0004	29.0	3.48%	731.6	1.52%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-4	-9.734e+00	0.0005	17.0	2.04%	318.1	0.66%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-4	-9.689e+00	0.0005	86.0	10.31%	3230.9	6.71%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-4	-9.252e+00	0.0008	48.0	5.76%	1541.1	3.20%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-9.138e+00	0.0009	19.0	2.28%	401.5	0.83%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-3	-8.741e+00	0.0013	43.0	5.16%	1360.5	2.82%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-3	-8.331e+00	0.0019	12.0	1.44%	199.2	0.41%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-3	-7.779e+00	0.0032	13.0	1.56%	243.9	0.51%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-3	-7.698e+00	0.0034	181.0	21.70%	8279.6	17.19%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-3	-7.369e+00	0.0047	38.0	4.56%	1236.6	2.57%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-3	-7.208e+00	0.0054	11.0	1.32%	195.7	0.41%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-3	-7.056e+00	0.0062	64.0	7.67%	2448.5	5.08%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-2	-6.837e+00	0.0075	18.0	2.16%	448.2	0.93%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-2	-6.258e+00	0.0132	163.0	19.54%	7584.9	15.74%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-2	-6.232e+00	0.0132	20.0	2.40%	552.3	1.15%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-6.141e+00	0.0142	99.0	11.87%	4281.7	8.89%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-2	-6.067e+00	0.0151	30.0	3.60%	978.8	2.03%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-2	-6.009e+00	0.0157	147.0	17.63%	6785.6	14.08%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-2	-5.952e+00	0.0163	26.0	3.12%	814.7	1.69%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-2	-5.478e+00	0.0258	17.0	2.04%	470.1	0.98%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-2	-5.428e+00	0.0266	45.0	5.40%	1712.3	3.55%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-5.408e+00	0.0267	45.0	5.40%	1715.0	3.56%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-2	-5.163e+00	0.0336	20.0	2.40%	609.2	1.26%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-2	-4.976e+00	0.0399	13.0	1.56%	337.2	0.70%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-2	-4.914e+00	0.0417	15.0	1.80%	419.0	0.87%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-4.869e+00	0.0430	29.0	3.48%	1022.5	2.12%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-2	-4.794e+00	0.0457	11.0	1.32%	269.8	0.56%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-2	-4.733e+00	0.0478	21.0	2.52%	678.9	1.41%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-4.176e+00	0.0822	23.0	2.76%	806.6	1.67%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-1	-4.148e+00	0.0833	25.0	3.00%	899.9	1.87%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-4.057e+00	0.0900	30.0	3.60%	1139.6	2.37%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-1	-3.948e+00	0.0990	24.0	2.88%	870.0	1.81%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.900e+00	0.1010	4.0	0.48%	59.4	0.12%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-1	-3.900e+00	0.1010	4.0	0.48%	59.5	0.12%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-1	-3.827e+00	0.1071	21.0	2.52%	743.4	1.54%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.804e+00	0.1071	6.0	0.72%	124.9	0.26%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-3.804e+00	0.1071	6.0	0.72%	124.9	0.26%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-3.744e+00	0.1118	3.0	0.36%	35.6	0.07%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-3.722e+00	0.1129	20.0	2.40%	706.7	1.47%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1	-3.700e+00	0.1140	62.0	7.43%	2767.3	5.74%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-1	-3.668e+00	0.1162	15.0	1.80%	488.8	1.01%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.666e+00	0.1162	21.0	2.52%	756.2	1.57%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.652e+00	0.1162	15.0	1.80%	489.6	1.02%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-1	-3.643e+00	0.1162	18.0	2.16%	622.2	1.29%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-1	-3.612e+00	0.1170	8.0	0.96%	203.8	0.42%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.546e+00	0.1235	7.0	0.84%	168.8	0.35%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-3.462e+00	0.1327	11.0	1.32%	330.3	0.69%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-3.390e+00	0.1410	24.0	2.88%	920.7	1.91%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-3.284e+00	0.1550	7.0	0.84%	178.5	0.37%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-3.203e+00	0.1663	9.0	1.08%	261.8	0.54%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-3.191e+00	0.1664	29.0	3.48%	1181.9	2.45%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e-1	-3.134e+00	0.1742	2.0	0.24%	19.5	0.04%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-1	-3.103e+00	0.1778	60.0	7.19%	2764.9	5.74%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-3.061e+00	0.1833	76.0	9.11%	3611.3	7.50%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.996e+00	0.1936	4.0	0.48%	79.2	0.16%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-1	-2.947e+00	0.2012	20.0	2.40%	773.6	1.61%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-2.905e+00	0.2076	5.0	0.60%	117.0	0.24%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-2.905e+00	0.2076	16.0	1.92%	589.9	1.22%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.903e+00	0.2076	8.0	0.96%	235.6	0.49%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-2.893e+00	0.2076	16.0	1.92%	590.9	1.23%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-2.887e+00	0.2076	86.0	10.31%	4180.3	8.68%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-1	-2.864e+00	0.2076	22.0	2.64%	877.3	1.82%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-2.798e+00	0.2175	11.0	1.32%	370.5	0.77%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-2.792e+00	0.2175	38.0	4.56%	1682.7	3.49%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-2.773e+00	0.2187	87.0	10.43%	4260.7	8.84%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-1	-2.742e+00	0.2234	22.0	2.64%	890.8	1.85%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-1	-2.742e+00	0.2234	16.0	1.92%	603.3	1.25%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-2.721e+00	0.2238	15.0	1.80%	558.1	1.16%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-1	-2.686e+00	0.2296	15.0	1.80%	561.7	1.17%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-1	-2.680e+00	0.2296	14.0	1.68%	515.9	1.07%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-1	-2.679e+00	0.2296	3.0	0.36%	54.2	0.11%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-1	-2.676e+00	0.2296	9.0	1.08%	290.9	0.60%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-2.652e+00	0.2296	2.0	0.24%	25.6	0.05%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-1	-2.646e+00	0.2296	84.0	10.07%	4129.5	8.57%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-2.636e+00	0.2296	158.0	18.94%	8175.6	16.97%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-1	-2.632e+00	0.2296	37.0	4.44%	1655.9	3.44%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-1	-2.619e+00	0.2296	71.0	8.51%	3439.5	7.14%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-2.600e+00	0.2310	20.0	2.40%	808.2	1.68%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-2.549e+00	0.2411	27.0	3.24%	1160.3	2.41%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-2.482e+00	0.2557	17.0	2.04%	675.6	1.40%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e-1	-2.442e+00	0.2640	37.0	4.44%	1686.0	3.50%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.384e+00	0.2774	17.0	2.04%	685.5	1.42%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-2.362e+00	0.2810	5.0	0.60%	138.2	0.29%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.255e+00	0.3103	20.0	2.40%	847.4	1.76%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.211e+00	0.3217	77.0	9.23%	3859.2	8.01%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-2.194e+00	0.3247	100.0	11.99%	5118.4	10.62%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.170e+00	0.3297	22.0	2.64%	958.3	1.99%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-2.142e+00	0.3338	7.0	0.84%	235.6	0.49%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.142e+00	0.3338	7.0	0.84%	235.7	0.49%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-2.115e+00	0.3403	123.0	14.75%	6410.7	13.31%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.115e+00	0.3403	8.0	0.96%	282.1	0.59%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.089e+00	0.3440	9.0	1.08%	330.1	0.69%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.082e+00	0.3440	25.0	3.00%	1123.4	2.33%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.064e+00	0.3473	246.0	29.50%	13329.9	27.67%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.046e+00	0.3510	5.0	0.60%	153.7	0.32%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-2.038e+00	0.3514	6.0	0.72%	197.3	0.41%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.010e+00	0.3587	113.0	13.55%	5892.5	12.23%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.000e+00	0.3594	18.0	2.16%	779.0	1.62%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.993e+00	0.3594	67.0	8.03%	3373.3	7.00%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.989e+00	0.3594	5.0	0.60%	156.3	0.32%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.959e+00	0.3666	4.0	0.48%	116.0	0.24%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.939e+00	0.3715	9.0	1.08%	342.6	0.71%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.874e+00	0.3933	27.0	3.24%	1259.2	2.61%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.844e+00	0.4025	5.0	0.60%	164.3	0.34%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.843e+00	0.4025	14.0	1.68%	596.2	1.24%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.808e+00	0.4117	14.0	1.68%	600.3	1.25%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.718e+00	0.4475	11.0	1.32%	460.9	0.96%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.711e+00	0.4475	5.0	0.60%	172.4	0.36%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.672e+00	0.4620	6.0	0.72%	221.5	0.46%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.671e+00	0.4620	16.0	1.92%	719.1	1.49%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-1.662e+00	0.4620	2.0	0.24%	46.6	0.10%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.616e+00	0.4789	104.0	12.47%	5531.8	11.48%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.603e+00	0.4821	3.0	0.36%	89.2	0.19%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.598e+00	0.4821	2.0	0.24%	48.8	0.10%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.594e+00	0.4821	7.0	0.84%	275.5	0.57%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.580e+00	0.4838	182.0	21.82%	9933.4	20.62%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.540e+00	0.5000	6.0	0.72%	231.5	0.48%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.528e+00	0.5031	15.0	1.80%	687.6	1.43%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.516e+00	0.5058	5.0	0.60%	185.7	0.39%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.503e+00	0.5091	4.0	0.48%	139.8	0.29%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.486e+00	0.5115	11.0	1.32%	486.0	1.01%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.486e+00	0.5115	11.0	1.32%	486.9	1.01%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.473e+00	0.5150	12.0	1.44%	539.8	1.12%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.471e+00	0.5150	4.0	0.48%	141.2	0.29%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.449e+00	0.5210	80.0	9.59%	4254.2	8.83%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.449e+00	0.5210	13.0	1.56%	594.8	1.23%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.446e+00	0.5210	20.0	2.40%	963.0	2.00%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.442e+00	0.5210	10.0	1.20%	440.9	0.92%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.429e+00	0.5210	20.0	2.40%	966.5	2.01%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.426e+00	0.5210	2.0	0.24%	54.4	0.11%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.418e+00	0.5210	30.0	3.60%	1506.8	3.13%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.406e+00	0.5218	20.0	2.40%	970.1	2.01%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.400e+00	0.5219	2.0	0.24%	55.7	0.12%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.383e+00	0.5279	26.0	3.12%	1297.2	2.69%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.332e+00	0.5521	27.0	3.24%	1362.3	2.83%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.325e+00	0.5527	2.0	0.24%	58.1	0.12%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.304e+00	0.5614	7.0	0.84%	302.1	0.63%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.293e+00	0.5645	4.0	0.48%	153.5	0.32%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.265e+00	0.5771	6.0	0.72%	255.4	0.53%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.265e+00	0.5771	34.0	4.08%	1761.4	3.66%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.259e+00	0.5771	100.0	11.99%	5451.1	11.31%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.255e+00	0.5771	25.0	3.00%	1270.7	2.64%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.225e+00	0.5877	24.0	2.88%	1222.1	2.54%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.196e+00	0.6015	67.0	8.03%	3620.1	7.51%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.192e+00	0.6015	28.0	3.36%	1449.5	3.01%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.191e+00	0.6015	11.0	1.32%	525.6	1.09%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.190e+00	0.6015	10.0	1.20%	472.6	0.98%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.188e+00	0.6015	33.0	3.96%	1726.0	3.58%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.172e+00	0.6015	46.0	5.52%	2453.7	5.09%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.166e+00	0.6015	20.0	2.40%	1016.1	2.11%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.162e+00	0.6015	24.0	2.88%	1236.3	2.57%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.157e+00	0.6015	7.0	0.84%	318.5	0.66%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.155e+00	0.6015	53.0	6.35%	2850.8	5.92%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.121e+00	0.6147	31.0	3.72%	1633.3	3.39%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.107e+00	0.6204	54.0	6.47%	2923.2	6.07%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.105e+00	0.6204	15.0	1.80%	755.7	1.57%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.102e+00	0.6204	14.0	1.68%	701.7	1.46%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.094e+00	0.6204	72.0	8.63%	3942.4	8.18%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.079e+00	0.6251	1.0	0.12%	25.0	0.05%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.070e+00	0.6276	122.0	14.63%	6790.5	14.09%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.065e+00	0.6276	7.0	0.84%	329.1	0.68%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.047e+00	0.6354	28.0	3.36%	1486.6	3.09%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.033e+00	0.6416	17.0	2.04%	879.8	1.83%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.030e+00	0.6416	6.0	0.72%	280.5	0.58%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.014e+00	0.6470	34.0	4.08%	1831.2	3.80%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-9.626e-01	0.6781	43.0	5.16%	2355.0	4.89%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-9.579e-01	0.6781	35.0	4.20%	1905.2	3.95%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-9.464e-01	0.6825	16.0	1.92%	842.9	1.75%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-9.394e-01	0.6840	3.0	0.36%	130.8	0.27%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-9.384e-01	0.6840	5.0	0.60%	237.9	0.49%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-9.377e-01	0.6840	11.0	1.32%	566.7	1.18%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-9.221e-01	0.6860	61.0	7.31%	3392.3	7.04%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-9.203e-01	0.6860	48.0	5.76%	2654.6	5.51%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-9.125e-01	0.6862	44.0	5.28%	2430.7	5.05%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-9.113e-01	0.6862	4.0	0.48%	186.4	0.39%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-9.082e-01	0.6862	24.0	2.88%	1301.0	2.70%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-8.933e-01	0.6897	3.0	0.36%	134.7	0.28%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-8.865e-01	0.6913	53.0	6.35%	2952.6	6.13%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-8.785e-01	0.6936	1.0	0.12%	31.4	0.07%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-8.679e-01	0.6978	11.0	1.32%	579.1	1.20%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-8.660e-01	0.6978	42.0	5.04%	2334.5	4.85%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-8.567e-01	0.6993	77.0	9.23%	4336.2	9.00%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-8.475e-01	0.7025	56.0	6.71%	3140.2	6.52%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-8.466e-01	0.7025	10.0	1.20%	527.5	1.09%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-8.436e-01	0.7025	6.0	0.72%	304.5	0.63%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-8.377e-01	0.7025	2.0	0.24%	85.8	0.18%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-8.230e-01	0.7073	60.0	7.19%	3380.5	7.02%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-8.204e-01	0.7073	4.0	0.48%	197.0	0.41%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-8.196e-01	0.7073	12.0	1.44%	645.9	1.34%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-8.150e-01	0.7073	26.0	3.12%	1441.2	2.99%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-8.090e-01	0.7073	16.0	1.92%	874.5	1.82%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-7.862e-01	0.7179	9.0	1.08%	482.5	1.00%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-7.810e-01	0.7185	39.0	4.68%	2196.3	4.56%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-7.777e-01	0.7185	13.0	1.56%	711.8	1.48%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-7.507e-01	0.7343	23.0	2.76%	1290.1	2.68%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-7.419e-01	0.7376	49.0	5.88%	2787.2	5.79%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-7.324e-01	0.7415	21.0	2.52%	1181.1	2.45%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-7.230e-01	0.7454	3.0	0.36%	151.9	0.32%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-7.201e-01	0.7454	55.0	6.59%	3143.9	6.53%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-7.151e-01	0.7454	9.0	1.08%	496.8	1.03%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-7.112e-01	0.7454	1.0	0.12%	39.1	0.08%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-6.941e-01	0.7545	14.0	1.68%	789.8	1.64%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-6.936e-01	0.7545	1.0	0.12%	40.6	0.08%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-6.827e-01	0.7568	36.0	4.32%	2064.9	4.29%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-6.779e-01	0.7574	24.0	2.88%	1372.8	2.85%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-6.666e-01	0.7628	24.0	2.88%	1376.5	2.86%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-6.660e-01	0.7628	5.0	0.60%	274.6	0.57%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-6.550e-01	0.7655	19.0	2.28%	1090.5	2.26%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-6.496e-01	0.7665	66.0	7.91%	3817.3	7.92%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-6.344e-01	0.7751	8.0	0.96%	455.1	0.94%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-6.337e-01	0.7751	6.0	0.72%	338.7	0.70%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-6.309e-01	0.7751	53.0	6.35%	3074.6	6.38%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-6.167e-01	0.7796	15.0	1.80%	869.2	1.80%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-6.138e-01	0.7796	1.0	0.12%	45.7	0.09%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-6.123e-01	0.7796	21.0	2.52%	1221.6	2.54%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-6.027e-01	0.7813	55.0	6.59%	3206.6	6.66%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-6.021e-01	0.7813	32.0	3.84%	1867.4	3.88%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-5.958e-01	0.7813	67.0	8.03%	3908.0	8.11%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-5.822e-01	0.7882	42.0	5.04%	2460.4	5.11%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-5.678e-01	0.7965	4.0	0.48%	231.6	0.48%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-5.613e-01	0.7987	7.0	0.84%	412.6	0.86%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.560e-01	0.7998	4.0	0.48%	233.6	0.48%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-5.514e-01	0.8004	8.0	0.96%	474.2	0.98%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-5.458e-01	0.8019	1.0	0.12%	50.2	0.10%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-5.456e-01	0.8019	41.0	4.92%	2422.0	5.03%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-5.374e-01	0.8026	68.0	8.15%	4005.6	8.31%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.074e-01	0.8239	5.0	0.60%	303.1	0.63%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-5.072e-01	0.8239	51.0	6.12%	3030.1	6.29%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-5.063e-01	0.8239	3.0	0.36%	180.5	0.37%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-5.003e-01	0.8239	4.0	0.48%	243.4	0.51%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-4.879e-01	0.8276	13.0	1.56%	792.7	1.65%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.842e-01	0.8276	81.0	9.71%	4805.7	9.97%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-4.756e-01	0.8317	29.0	3.48%	1751.9	3.64%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-4.716e-01	0.8320	15.0	1.80%	918.2	1.91%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-4.662e-01	0.8335	68.0	8.15%	4057.4	8.42%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-4.611e-01	0.8347	6.0	0.72%	375.5	0.78%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-4.514e-01	0.8398	13.0	1.56%	805.7	1.67%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-4.435e-01	0.8434	46.0	5.52%	2777.5	5.77%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-4.421e-01	0.8434	14.0	1.68%	869.1	1.80%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-4.383e-01	0.8434	18.0	2.16%	1112.7	2.31%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-4.237e-01	0.8510	7.0	0.84%	447.5	0.93%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.204e-01	0.8510	18.0	2.16%	1120.2	2.33%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-4.028e-01	0.8628	27.0	3.24%	1671.3	3.47%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-3.995e-01	0.8628	39.0	4.68%	2391.2	4.96%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.652e-01	0.8895	9.0	1.08%	591.6	1.23%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-3.522e-01	0.8981	4.0	0.48%	276.9	0.57%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-3.512e-01	0.8981	46.0	5.52%	2846.0	5.91%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-3.055e-01	0.9344	9.0	1.08%	615.9	1.28%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-3.035e-01	0.9344	11.0	1.32%	743.1	1.54%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-3.017e-01	0.9344	125.0	14.99%	7586.1	15.75%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-2.961e-01	0.9344	113.0	13.55%	6885.5	14.29%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-2.936e-01	0.9344	1.0	0.12%	80.0	0.17%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-2.935e-01	0.9344	166.0	19.90%	10011.4	20.78%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-2.930e-01	0.9344	79.0	9.47%	4872.4	10.11%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-2.881e-01	0.9344	6.0	0.72%	428.2	0.89%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.821e-01	0.9344	1.0	0.12%	81.6	0.17%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.821e-01	0.9344	1.0	0.12%	81.2	0.17%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-2.755e-01	0.9344	10.0	1.20%	693.6	1.44%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.580e-01	0.9437	10.0	1.20%	702.1	1.46%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-2.521e-01	0.9462	8.0	0.96%	575.1	1.19%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.505e-01	0.9462	5.0	0.60%	376.2	0.78%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.503e-01	0.9462	38.0	4.56%	2451.2	5.09%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-2.438e-01	0.9462	4.0	0.48%	310.3	0.64%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.128e-01	0.9710	10.0	1.20%	728.7	1.51%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.072e-01	0.9732	21.0	2.52%	1439.0	2.99%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.055e-01	0.9732	29.0	3.48%	1941.6	4.03%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.965e-01	0.9773	14.0	1.68%	1000.5	2.08%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.947e-01	0.9773	31.0	3.72%	2077.6	4.31%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.759e-01	0.9912	114.0	13.67%	7143.9	14.83%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.727e-01	0.9912	5.0	0.60%	413.0	0.86%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.523e-01	1.0000	2.0	0.24%	199.3	0.41%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.497e-01	1.0000	5.0	0.60%	427.4	0.89%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.496e-01	1.0000	3.0	0.36%	279.5	0.58%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.438e-01	1.0000	1.0	0.12%	116.4	0.24%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.312e-01	1.0000	14.0	1.68%	1060.5	2.20%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.261e-01	1.0000	2.0	0.24%	212.9	0.44%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.260e-01	1.0000	11.0	1.32%	865.0	1.80%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.209e-01	1.0000	9.0	1.08%	732.5	1.52%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.120e-01	1.0000	3.0	0.36%	302.4	0.63%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.104e-01	1.0000	4.0	0.48%	381.5	0.79%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.043e-01	1.0000	2.0	0.24%	225.6	0.47%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.038e-01	1.0000	3.0	0.36%	308.2	0.64%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.021e-01	1.0000	10.0	1.20%	822.2	1.71%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-9.893e-02	1.0000	54.0	6.47%	3666.7	7.61%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-9.531e-02	1.0000	43.0	5.16%	2985.6	6.20%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-9.351e-02	1.0000	126.0	15.11%	8083.2	16.78%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-8.513e-02	1.0000	18.0	2.16%	1391.1	2.89%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-7.840e-02	1.0000	3.0	0.36%	330.8	0.69%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-6.371e-02	1.0000	101.0	12.11%	6684.2	13.87%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-5.807e-02	1.0000	2.0	0.24%	265.3	0.55%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-5.016e-02	1.0000	1.0	0.12%	174.1	0.36%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-5.012e-02	1.0000	2.0	0.24%	275.5	0.57%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-4.795e-02	1.0000	2.0	0.24%	278.3	0.58%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-4.545e-02	1.0000	12.0	1.44%	1062.7	2.21%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-4.312e-02	1.0000	8.0	0.96%	775.7	1.61%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.212e-02	1.0000	90.0	10.79%	6280.2	13.04%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.021e-02	1.0000	68.0	8.15%	4910.7	10.19%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.484e-02	1.0000	9.0	1.08%	961.5	2.00%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.086e-02	1.0000	8.0	0.96%	912.3	1.89%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-5.659e-03	1.0000	63.0	7.55%	4837.9	10.04%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-5.321e-03	1.0000	18.0	2.16%	1757.2	3.65%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.150e-03	1.0000	38.0	4.56%	3180.1	6.60%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.400e-05	1.0000	46.0	5.52%	4462.6	9.26%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.000e-06	1.0000	49.0	5.88%	5025.4	10.43%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	16.7	0.03%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	0.000e+00	1.0000	0.0	0.00%	194.6	0.40%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	0.000e+00	1.0000	0.0	0.00%	137.5	0.29%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	29.8	0.06%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	40.1	0.08%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	0.000e+00	1.0000	0.0	0.00%	104.8	0.22%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	39.8	0.08%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	197.5	0.41%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	73.3	0.15%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	0.000e+00	1.0000	0.0	0.00%	64.8	0.13%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	15.5	0.03%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	10.2	0.02%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	30.9	0.06%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	3.2	0.01%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	10.4	0.02%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	43.8	0.09%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	51.5	0.11%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.02%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.0	0.01%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	27.1	0.06%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	8.1	0.02%