p-value: | 1e-7 |
log p-value: | -1.814e+01 |
Information Content per bp: | 1.828 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 3.12% |
Number of Background Sequences with motif | 393.7 |
Percentage of Background Sequences with motif | 0.82% |
Average Position of motif in Targets | 48.6 +/- 24.9bp |
Average Position of motif in Background | 51.8 +/- 28.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG --CCAGACAG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG-- --CCAGACRSVB |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG --BCAGACWA |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CAGCAGACAG---- CAAATCCAGACATCACA |
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ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------CAGCAGACAG AGAGRRACAGCWGAC-- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG- -----CACAGN |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAGCAGACAG CACAGCAGGGGG |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG -ARNTGACA- |
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Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CAGCAGACAG- NNNVCTGWGYAAACASN |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAGCAGACAG-- --VBTGWCAGCB |
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