Information for 6-TGGGCTTTTTGGCTCT (Motif 15)

A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
Reverse Opposite:
C T G A A C T G C G T A A T C G G A T C A G T C C G T A T C G A G C T A G T C A C G T A A C T G A G T C A G T C G T A C G T C A
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.698
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif46.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets38.0 +/- 26.2bp
Average Position of motif in Background56.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCTTTTTGGCTCT
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCT
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
--NGCTN---------
 A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCT
CCTTGCAATTTTTNN----
 A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCTTTTTGGCTCT
TTGACCTTTTGACCTT-
 A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGGGCTTTTTGGCTCT
ATGGGGTGAT-------
 A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
NGGGATTA--------
 A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
TTGACTTTT-------
 A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCTTTTTGGCTCT
GTGACCTT---------
 A C G T A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT---
----CTGATTGGTCNATTT
 A C G T A C T G T A C G C T A G G T A C A C G T A C G T C G A T A C G T G A C T T A C G C T A G A T G C G A C T G T A C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T